Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn3aA2ASI5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Gm38285-201ENSMUST00000192928 922 ntBASIC20.72■□□□□ 0.91
Scn3aA2ASI5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.72■□□□□ 0.91
Scn3aA2ASI5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Scn3aA2ASI5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scn3aA2ASI5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn3aA2ASI5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn3aA2ASI5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Gm15375-201ENSMUST00000119510 849 ntBASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn3aA2ASI5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.67■□□□□ 0.9
Scn3aA2ASI5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.67■□□□□ 0.9
Scn3aA2ASI5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn3aA2ASI5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Gm10138-203ENSMUST00000206952 366 ntBASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Scn3aA2ASI5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms