Protein–RNA interactions for Protein: A2ACP1

Ttc39a, Tetratricopeptide repeat protein 39A, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39aA2ACP1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc39aA2ACP1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ttc39aA2ACP1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Gm13158-201ENSMUST00000122007 736 ntBASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Flg-201ENSMUST00000050758 1488 ntBASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ttc39aA2ACP1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Gm2399-201ENSMUST00000104944 225 ntBASIC18■□□□□ 0.47
Ttc39aA2ACP1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Mir6982-201ENSMUST00000184354 68 ntBASIC18■□□□□ 0.47
Ttc39aA2ACP1 Mir7071-201ENSMUST00000184847 69 ntBASIC18■□□□□ 0.47
Ttc39aA2ACP1 AC140264.2-202ENSMUST00000218746 817 ntBASIC18■□□□□ 0.47
Ttc39aA2ACP1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Gm37352-201ENSMUST00000193908 2181 ntBASIC18■□□□□ 0.47
Ttc39aA2ACP1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ttc39aA2ACP1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ttc39aA2ACP1 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ttc39aA2ACP1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ttc39aA2ACP1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Ttc39aA2ACP1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ttc39aA2ACP1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms