Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm3854A0A1B0GSS6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm3854A0A1B0GSS6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Mtag2-201ENSMUST00000058665 714 ntBASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.48■□□□□ 0.55
Gm3854A0A1B0GSS6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gm3854A0A1B0GSS6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gm3854A0A1B0GSS6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Gm3854A0A1B0GSS6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Gm3854A0A1B0GSS6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Gm3854A0A1B0GSS6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3854A0A1B0GSS6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3854A0A1B0GSS6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gm3854A0A1B0GSS6 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms