Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm13534-201ENSMUST00000121169 513 ntBASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lnp1A0A1B0GSK3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm42642-201ENSMUST00000200683 355 ntBASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lnp1A0A1B0GSK3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm18284-201ENSMUST00000172604 624 ntBASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lnp1A0A1B0GSK3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.36■□□□□ 0.05
Lnp1A0A1B0GSK3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm26571-201ENSMUST00000181399 666 ntBASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm18671-201ENSMUST00000214826 683 ntBASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.35■□□□□ 0.05
Lnp1A0A1B0GSK3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lnp1A0A1B0GSK3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms