Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cfap99A0A140LIX9 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.05■■□□□ 1.12
Cfap99A0A140LIX9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cfap99A0A140LIX9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Gm13181-201ENSMUST00000120117 1069 ntBASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cfap99A0A140LIX9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Golph3-205ENSMUST00000228671 2842 ntBASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Mir6982-201ENSMUST00000184354 68 ntBASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cfap99A0A140LIX9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Cfap99A0A140LIX9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cfap99A0A140LIX9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.01■■□□□ 1.11
Cfap99A0A140LIX9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Gm22325-201ENSMUST00000158904 308 ntBASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Gm5784-201ENSMUST00000179344 2478 ntBASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22■■□□□ 1.11
Cfap99A0A140LIX9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cfap99A0A140LIX9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Gm12896-201ENSMUST00000118430 226 ntBASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cfap99A0A140LIX9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Gm27275-201ENSMUST00000184318 272 ntBASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cfap99A0A140LIX9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms