Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav15d-2-dv6d-2A0A0G2JGQ7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.21■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13146-201ENSMUST00000118508 780 ntBASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.15■□□□□ 0.18
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms