Protein–RNA interactions for Protein: A0A0G2JGD3

Tmem116, Transmembrane protein 116 (Fragment), mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem116A0A0G2JGD3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tmem116A0A0G2JGD3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tmem116A0A0G2JGD3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tmem116A0A0G2JGD3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Gm12441-201ENSMUST00000121806 588 ntBASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Rab3c-203ENSMUST00000224180 967 ntBASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Tmem116A0A0G2JGD3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Gm4968-201ENSMUST00000071458 858 ntBASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Tmem116A0A0G2JGD3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Tmem116A0A0G2JGD3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Tmem116A0A0G2JGD3 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms