Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav13n-2A0A0G2JF93 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13n-2A0A0G2JF93 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13n-2A0A0G2JF93 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm43530-201ENSMUST00000195920 274 ntBASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13n-2A0A0G2JF93 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Fst-202ENSMUST00000223640 2612 ntBASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13n-2A0A0G2JF93 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms