Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13n-1A0A0G2JEU8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm6365-201ENSMUST00000054711 744 ntBASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm7290-201ENSMUST00000104990 617 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm12918-201ENSMUST00000120234 636 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm15710-201ENSMUST00000121821 636 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm5075-201ENSMUST00000196916 622 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Gm5408-201ENSMUST00000197998 747 ntBASIC13.3□□□□□ -0.28
Trav13n-1A0A0G2JEU8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms