Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm42778-201ENSMUST00000199644 553 ntBASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Gm13234-201ENSMUST00000120010 747 ntBASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav9n-2A0A0G2JDP3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms