Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav9-4A0A0B4J1K2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav9-4A0A0B4J1K2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav9-4A0A0B4J1K2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9-4A0A0B4J1K2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9-4A0A0B4J1K2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav9-4A0A0B4J1K2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav9-4A0A0B4J1K2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav9-4A0A0B4J1K2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms