Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.7□□□□□ -0.38
Trav11A0A0B4J1J9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Gm5812-201ENSMUST00000061073 957 ntBASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav11A0A0B4J1J9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav11A0A0B4J1J9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav11A0A0B4J1J9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav11A0A0B4J1J9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav11A0A0B4J1J9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms