Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm43566-201ENSMUST00000196851 808 ntBASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv5A0A0B4J1G9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv5A0A0B4J1G9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv5A0A0B4J1G9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trbv5A0A0B4J1G9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv5A0A0B4J1G9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv5A0A0B4J1G9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv5A0A0B4J1G9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv5A0A0B4J1G9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv5A0A0B4J1G9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv5A0A0B4J1G9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Serp2-204ENSMUST00000228055 705 ntBASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms