Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trbv1A0A0B4J1G7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Gm12821-201ENSMUST00000120022 600 ntBASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trbv1A0A0B4J1G7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv1A0A0B4J1G7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trbv1A0A0B4J1G7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv1A0A0B4J1G7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trbv1A0A0B4J1G7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm21956-201ENSMUST00000179946 522 ntBASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm43137-201ENSMUST00000198052 594 ntBASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trbv1A0A0B4J1G7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.44□□□□□ -0.1
Trbv1A0A0B4J1G7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trbv1A0A0B4J1G7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv1A0A0B4J1G7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms