Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6d-5A0A075B6B9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6d-5A0A075B6B9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6d-5A0A075B6B9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-5A0A075B6B9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-5A0A075B6B9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-5A0A075B6B9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-5A0A075B6B9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms