Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav16A0A075B653 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav16A0A075B653 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.26□□□□□ -0.13
Trav16A0A075B653 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav16A0A075B653 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Trav16A0A075B653 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Trav16A0A075B653 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav16A0A075B653 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.25□□□□□ -0.13
Trav16A0A075B653 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav16A0A075B653 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav16A0A075B653 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Gm22238-201ENSMUST00000175222 88 ntBASIC14.22□□□□□ -0.13
Trav16A0A075B653 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav16A0A075B653 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav16A0A075B653 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.21□□□□□ -0.13
Trav16A0A075B653 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms