Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.08■□□□□ 0.01
Trav15-2-dv6-2A0A075B650 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav15-2-dv6-2A0A075B650 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav15-2-dv6-2A0A075B650 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav15-2-dv6-2A0A075B650 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav15-2-dv6-2A0A075B650 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav15-2-dv6-2A0A075B650 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Gm12251-201ENSMUST00000117893 792 ntBASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Gm43137-201ENSMUST00000198052 594 ntBASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.05■□□□□ -0
Trav15-2-dv6-2A0A075B650 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms