Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-2A0A075B638 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-2A0A075B638 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Trav4-2A0A075B638 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav4-2A0A075B638 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav4-2A0A075B638 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav4-2A0A075B638 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms