Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.33□□□□□ -0.12
Trav6n-5A0A075B621 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Mir6538-201ENSMUST00000183713 110 ntBASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-5A0A075B621 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-5A0A075B621 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-5A0A075B621 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-5A0A075B621 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms