Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav4n-4A0A075B615 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav4n-4A0A075B615 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4n-4A0A075B615 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4n-4A0A075B615 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms