Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-6A0A075B603 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav6-6A0A075B603 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Gm9847-201ENSMUST00000052528 599 ntBASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6-6A0A075B603 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.72□□□□□ -0.21
Trav6-6A0A075B603 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav6-6A0A075B603 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Trav6-6A0A075B603 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav6-6A0A075B603 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav6-6A0A075B603 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms