Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm22325-201ENSMUST00000158904 308 ntBASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav5-1A0A075B5Z7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav5-1A0A075B5Z7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm27011-201ENSMUST00000182352 972 ntBASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav5-1A0A075B5Z7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm12527-201ENSMUST00000117967 564 ntBASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav5-1A0A075B5Z7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav5-1A0A075B5Z7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav5-1A0A075B5Z7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-1A0A075B5Z7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-1A0A075B5Z7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-1A0A075B5Z7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav5-1A0A075B5Z7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm2399-201ENSMUST00000104944 225 ntBASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms