Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.31□□□□□ -1.08
Col2a1P28481 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Col2a1P28481 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm37633-201ENSMUST00000192858 2700 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm4073-201ENSMUST00000176792 3500 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm7821-201ENSMUST00000117111 788 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm12710-201ENSMUST00000119011 216 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm27156-201ENSMUST00000184589 754 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm38030-201ENSMUST00000192376 475 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm44943-201ENSMUST00000207254 300 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm34424-201ENSMUST00000213400 782 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 AC131654.1-201ENSMUST00000219675 745 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 AC154380.1-201ENSMUST00000226804 720 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.31□□□□□ -1.08
Col2a1P28481 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Col2a1P28481 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Col2a1P28481 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Col2a1P28481 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Col2a1P28481 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col2a1P28481 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm22728-201ENSMUST00000158087 129 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Mir1929-201ENSMUST00000158635 93 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm24228-201ENSMUST00000158829 129 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm4373-201ENSMUST00000178571 556 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm26528-201ENSMUST00000181965 283 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm8245-201ENSMUST00000182434 987 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Mir7033-201ENSMUST00000184259 81 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm4870-201ENSMUST00000198525 1251 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm5154-201ENSMUST00000203971 399 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm2221-201ENSMUST00000209342 418 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm10126-201ENSMUST00000221732 168 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Gm9985-201ENSMUST00000044101 510 ntBASIC8.3□□□□□ -1.08
Col2a1P28481 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Col2a1P28481 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Col2a1P28481 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Col2a1P28481 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.29□□□□□ -1.08
Col2a1P28481 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms