Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Vps53Q8CCB4 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm13768-201ENSMUST00000116469 929 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm14539-201ENSMUST00000117527 174 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm15047-201ENSMUST00000118891 454 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm13495-201ENSMUST00000121156 537 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm19007-201ENSMUST00000217746 874 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 AC147245.1-201ENSMUST00000223294 677 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Vps53Q8CCB4 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Vps53Q8CCB4 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm13739-201ENSMUST00000118020 530 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm14631-201ENSMUST00000119067 594 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm5835-201ENSMUST00000185806 1270 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm37469-201ENSMUST00000193728 890 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm27680-202ENSMUST00000199221 807 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm19254-201ENSMUST00000204828 294 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm29759-201ENSMUST00000205860 327 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 CT009764.1-201ENSMUST00000222260 483 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Diaph3-204ENSMUST00000226254 682 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm24411-201ENSMUST00000083428 131 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Rgs19-206ENSMUST00000108778 1427 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Rgs19-212ENSMUST00000165416 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Vps53Q8CCB4 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms