Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.95□□□□□ -1.14
NcanP55066 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.95□□□□□ -1.14
NcanP55066 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.95□□□□□ -1.14
NcanP55066 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
NcanP55066 Gm11416-201ENSMUST00000119111 863 ntBASIC7.95□□□□□ -1.14
NcanP55066 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
NcanP55066 Mir5617-201ENSMUST00000176786 57 ntBASIC7.95□□□□□ -1.14
NcanP55066 Gm43287-201ENSMUST00000197747 600 ntBASIC7.95□□□□□ -1.14
NcanP55066 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
NcanP55066 Gm39075-201ENSMUST00000206031 512 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.95□□□□□ -1.14
NcanP55066 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm19195-201ENSMUST00000222018 511 ntBASIC7.95□□□□□ -1.14
NcanP55066 AC154657.1-201ENSMUST00000226394 775 ntBASIC7.95□□□□□ -1.14
NcanP55066 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.95□□□□□ -1.14
NcanP55066 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.95□□□□□ -1.14
NcanP55066 Hdac4-202ENSMUST00000097644 8100 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 AC159264.1-202ENSMUST00000224856 3162 ntBASIC7.95□□□□□ -1.14
NcanP55066 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
NcanP55066 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
NcanP55066 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
NcanP55066 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Nucb1-210ENSMUST00000211765 4853 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
NcanP55066 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Gm44937-201ENSMUST00000207705 2691 ntBASIC7.94□□□□□ -1.14
NcanP55066 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
NcanP55066 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Gm12773-201ENSMUST00000120134 587 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm14612-201ENSMUST00000121522 881 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm15618-201ENSMUST00000121610 452 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm14990-201ENSMUST00000122354 445 ntBASIC7.94□□□□□ -1.14
NcanP55066 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm22882-201ENSMUST00000157749 124 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm9285-201ENSMUST00000177691 697 ntBASIC7.94□□□□□ -1.14
NcanP55066 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.94□□□□□ -1.14
NcanP55066 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC7.94□□□□□ -1.14
NcanP55066 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Gm42760-201ENSMUST00000199814 311 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm44487-201ENSMUST00000205145 325 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm9357-201ENSMUST00000207138 805 ntBASIC7.94□□□□□ -1.14
NcanP55066 Gm19047-201ENSMUST00000220922 1099 ntBASIC7.94□□□□□ -1.14
NcanP55066 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
NcanP55066 n-R5s217-201ENSMUST00000083341 116 ntBASIC7.94□□□□□ -1.14
NcanP55066 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Top3a-202ENSMUST00000102668 3542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Gm42788-201ENSMUST00000201604 1667 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 9530053A07Rik-204ENSMUST00000150948 7895 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.94□□□□□ -1.14
NcanP55066 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
NcanP55066 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
NcanP55066 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms