Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Col1a1P11087 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Gm7494-201ENSMUST00000121248 441 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Gm11257-201ENSMUST00000121313 315 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Gm5166-201ENSMUST00000121332 573 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC8.68□□□□□ -1.02
Col1a1P11087 Mir3085-201ENSMUST00000175493 89 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Gm21877-201ENSMUST00000185640 694 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm9357-201ENSMUST00000207138 805 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm29486-201ENSMUST00000088648 372 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Col1a1P11087 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 AC138284.3-201ENSMUST00000217345 4663 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col1a1P11087 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Col1a1P11087 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Col1a1P11087 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Col1a1P11087 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm13282-201ENSMUST00000121577 545 ntBASIC8.67□□□□□ -1.02
Col1a1P11087 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm26528-201ENSMUST00000181965 283 ntBASIC8.67□□□□□ -1.02
Col1a1P11087 Gm27186-201ENSMUST00000184223 307 ntBASIC8.67□□□□□ -1.02
Col1a1P11087 Mir6403-201ENSMUST00000185007 129 ntBASIC8.67□□□□□ -1.02
Col1a1P11087 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm43846-201ENSMUST00000200502 932 ntBASIC8.67□□□□□ -1.02
Col1a1P11087 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm9585-201ENSMUST00000219681 1404 ntBASIC8.67□□□□□ -1.02
Col1a1P11087 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Col1a1P11087 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC8.67□□□□□ -1.02
Col1a1P11087 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Col1a1P11087 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Col1a1P11087 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Phxr4-202ENSMUST00000216590 1391 ntBASIC8.66□□□□□ -1.02
Col1a1P11087 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Col1a1P11087 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC8.66□□□□□ -1.02
Col1a1P11087 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col1a1P11087 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
Col1a1P11087 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC8.66□□□□□ -1.02
Col1a1P11087 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms