Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 AC156802.2-201ENSMUST00000225239 5740 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Myo5c-201ENSMUST00000036555 6727 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm22438-201ENSMUST00000104049 132 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm14353-201ENSMUST00000122200 869 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm14380-201ENSMUST00000122298 431 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm23657-201ENSMUST00000122623 294 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm24680-201ENSMUST00000158759 126 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm17212-201ENSMUST00000166666 259 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm25617-201ENSMUST00000179548 133 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm27178-201ENSMUST00000184962 340 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm38373-201ENSMUST00000192042 288 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm25617-202ENSMUST00000198387 132 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm36758-201ENSMUST00000222594 310 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm15903-202ENSMUST00000199631 3518 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm37043-201ENSMUST00000194609 3105 ntBASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Scn3aA2ASI5 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm16026-205ENSMUST00000162923 641 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm23018-201ENSMUST00000177928 109 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm38022-201ENSMUST00000191762 403 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm42782-201ENSMUST00000197286 522 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Scn3aA2ASI5 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm20749-201ENSMUST00000186319 3492 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm28952-201ENSMUST00000189285 681 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm35108-201ENSMUST00000194321 699 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm33191-201ENSMUST00000195604 699 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm4525-201ENSMUST00000198831 254 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm8479-201ENSMUST00000203825 718 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.21□□□□□ -1.1
Scn3aA2ASI5 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Scn3aA2ASI5 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms