Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm31983-202ENSMUST00000210553 3155 ntTSL 5 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 AL670757.1-201ENSMUST00000223668 1959 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Mir700-201ENSMUST00000102169 79 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm38181-201ENSMUST00000181357 720 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm28080-201ENSMUST00000188552 722 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm45196-201ENSMUST00000206751 825 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 AC153961.2-201ENSMUST00000218877 164 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Mir337-201ENSMUST00000083592 97 ntBASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col6a3E9PWQ3 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm28187-201ENSMUST00000186885 2134 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm14787-201ENSMUST00000121236 388 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm6451-201ENSMUST00000121488 717 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm28980-201ENSMUST00000187877 219 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 AC122332.1-201ENSMUST00000214384 285 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm9110-201ENSMUST00000219035 617 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 CT009530.1-201ENSMUST00000227348 2927 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm12593-201ENSMUST00000120981 743 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm22724-201ENSMUST00000158091 127 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm7335-201ENSMUST00000172475 373 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm23810-201ENSMUST00000175150 74 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm19231-201ENSMUST00000193212 830 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm17965-201ENSMUST00000193904 517 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm44768-201ENSMUST00000205719 393 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Olfr471-201ENSMUST00000210091 936 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 AC162934.2-201ENSMUST00000221451 249 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col6a3E9PWQ3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm18800-202ENSMUST00000188688 1105 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm8942-201ENSMUST00000217892 400 ntBASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Col6a3E9PWQ3 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms