Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm9866-206ENSMUST00000222838 1580 ntTSL 5 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm14891-201ENSMUST00000117378 596 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm15665-201ENSMUST00000119116 847 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm16056-201ENSMUST00000119293 135 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm12727-201ENSMUST00000119885 359 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 n-R5s47-201ENSMUST00000122516 119 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm24738-201ENSMUST00000158856 123 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm29195-201ENSMUST00000189038 379 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm4545-201ENSMUST00000190797 603 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm9289-201ENSMUST00000221269 606 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.79□□□□□ -1
Ccdc47Q9D024 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ccdc47Q9D024 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc47Q9D024 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Ccdc47Q9D024 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm18765-201ENSMUST00000203166 660 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm7151-201ENSMUST00000211511 954 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc47Q9D024 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.78□□□□□ -1
Ccdc47Q9D024 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Ccdc47Q9D024 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ccdc47Q9D024 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Ccdc47Q9D024 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1
Ccdc47Q9D024 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Ccdc47Q9D024 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Gm25164-201ENSMUST00000158908 116 ntBASIC8.77□□□□□ -1.01
Ccdc47Q9D024 Gm4781-201ENSMUST00000167995 781 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms