Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm37891-201ENSMUST00000195585 1326 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm11371-201ENSMUST00000120294 385 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm7418-201ENSMUST00000162120 801 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm28114-201ENSMUST00000187232 379 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm17965-201ENSMUST00000193904 517 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm35108-201ENSMUST00000194321 699 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm33191-201ENSMUST00000195604 699 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm42734-201ENSMUST00000201656 878 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm5791-201ENSMUST00000220840 489 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.9□□□□□ -0.99
Vps54Q5SPW0 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.99
Vps54Q5SPW0 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Vps54Q5SPW0 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.9□□□□□ -0.99
Vps54Q5SPW0 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm11320-201ENSMUST00000119434 463 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm11850-201ENSMUST00000119679 479 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm5255-201ENSMUST00000120125 642 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm5135-201ENSMUST00000121100 573 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm7481-201ENSMUST00000182020 995 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm26413-201ENSMUST00000196783 126 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm18562-201ENSMUST00000209949 915 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm19056-201ENSMUST00000218220 797 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm45887-201ENSMUST00000212672 2998 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Vps54Q5SPW0 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 AC155298.3-201ENSMUST00000225307 3220 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Klf5-202ENSMUST00000226784 2852 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm15054-201ENSMUST00000117393 281 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm11263-201ENSMUST00000121853 749 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm11434-201ENSMUST00000122379 629 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm22025-201ENSMUST00000122734 302 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm22795-201ENSMUST00000157233 118 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm23639-201ENSMUST00000175078 132 ntBASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps54Q5SPW0 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms