Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Gm2654-201ENSMUST00000221381 1592 ntBASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx6-2D3Z4R4 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Cd59b-203ENSMUST00000111131 555 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm12180-201ENSMUST00000120905 661 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm14826-201ENSMUST00000121284 901 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm13997-201ENSMUST00000155641 336 ntTSL 3 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm23827-201ENSMUST00000157116 145 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm25604-201ENSMUST00000158359 133 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm2541-201ENSMUST00000161209 711 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm17042-201ENSMUST00000167075 1216 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm17158-201ENSMUST00000168150 493 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm21182-201ENSMUST00000178899 794 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm22616-201ENSMUST00000179783 100 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm38051-201ENSMUST00000193740 433 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm6308-201ENSMUST00000203226 313 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm6072-201ENSMUST00000203989 496 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm8268-201ENSMUST00000209683 458 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm18781-201ENSMUST00000211252 924 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 4933404K13Rik-203ENSMUST00000217125 1060 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm19810-201ENSMUST00000218521 251 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Arl15-202ENSMUST00000224068 1002 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Snora61-201ENSMUST00000083015 130 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 AC112680.1-201ENSMUST00000215435 1349 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm5975-201ENSMUST00000185256 1399 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm43869-201ENSMUST00000204742 1405 ntBASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Nkx6-2D3Z4R4 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx6-2D3Z4R4 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.86□□□□□ -1.47
Nkx6-2D3Z4R4 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx6-2D3Z4R4 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.86□□□□□ -1.47
Nkx6-2D3Z4R4 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.86□□□□□ -1.47
Nkx6-2D3Z4R4 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx6-2D3Z4R4 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms