Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm4863-201ENSMUST00000196907 1381 ntBASIC8.84□□□□□ -0.99
Vps53Q8CCB4 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.84□□□□□ -1
Vps53Q8CCB4 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm25546-201ENSMUST00000103977 132 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC8.83□□□□□ -1
Vps53Q8CCB4 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm4835-201ENSMUST00000155839 972 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm22604-201ENSMUST00000157604 311 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm25025-201ENSMUST00000175018 111 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm27595-201ENSMUST00000184579 112 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm29143-201ENSMUST00000189462 201 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm18428-201ENSMUST00000194986 791 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm43590-201ENSMUST00000195987 387 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm45319-201ENSMUST00000210220 318 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.83□□□□□ -1
Vps53Q8CCB4 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm24696-201ENSMUST00000083878 134 ntBASIC8.83□□□□□ -1
Vps53Q8CCB4 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Vps53Q8CCB4 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
Vps53Q8CCB4 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 AC093022.3-201ENSMUST00000226569 1926 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm22426-201ENSMUST00000103811 96 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm15209-201ENSMUST00000117703 400 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm22035-201ENSMUST00000157284 228 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm7560-201ENSMUST00000187748 873 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm5251-201ENSMUST00000188959 472 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm45074-201ENSMUST00000209091 1240 ntBASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.82□□□□□ -1
Vps53Q8CCB4 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.82□□□□□ -1
Vps53Q8CCB4 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms