Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.42□□□□□ -1.54
TcraP01849 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm43158-201ENSMUST00000198484 1555 ntBASIC5.42□□□□□ -1.54
TcraP01849 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC5.42□□□□□ -1.54
TcraP01849 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TcraP01849 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TcraP01849 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.42□□□□□ -1.54
TcraP01849 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 n-R5s90-201ENSMUST00000103968 118 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm25607-201ENSMUST00000104020 127 ntBASIC5.42□□□□□ -1.54
TcraP01849 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm13921-201ENSMUST00000119411 463 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm11955-201ENSMUST00000119801 470 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm8832-201ENSMUST00000119890 395 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm6798-201ENSMUST00000119961 360 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm15028-201ENSMUST00000120295 370 ntBASIC5.42□□□□□ -1.54
TcraP01849 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm13586-201ENSMUST00000121784 464 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm14380-201ENSMUST00000122298 431 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm24004-201ENSMUST00000158460 178 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm20452-201ENSMUST00000174686 513 ntBASIC5.42□□□□□ -1.54
TcraP01849 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC5.42□□□□□ -1.54
TcraP01849 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC5.42□□□□□ -1.54
TcraP01849 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
TcraP01849 Gm7481-201ENSMUST00000182020 995 ntBASIC5.42□□□□□ -1.54
TcraP01849 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm43555-201ENSMUST00000196588 310 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm43840-201ENSMUST00000199444 484 ntBASIC5.42□□□□□ -1.54
TcraP01849 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm32842-201ENSMUST00000212653 738 ntBASIC5.42□□□□□ -1.54
TcraP01849 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC5.42□□□□□ -1.54
TcraP01849 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC5.42□□□□□ -1.54
TcraP01849 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm19116-201ENSMUST00000218592 642 ntBASIC5.42□□□□□ -1.54
TcraP01849 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC5.42□□□□□ -1.54
TcraP01849 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.42□□□□□ -1.54
TcraP01849 AC123058.1-201ENSMUST00000223748 437 ntBASIC5.42□□□□□ -1.54
TcraP01849 AC167013.6-201ENSMUST00000226587 1067 ntBASIC5.42□□□□□ -1.54
TcraP01849 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TcraP01849 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TcraP01849 n-R5s74-201ENSMUST00000082654 116 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm16026-201ENSMUST00000094774 580 ntBASIC5.42□□□□□ -1.54
TcraP01849 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC5.42□□□□□ -1.54
TcraP01849 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.42□□□□□ -1.54
TcraP01849 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 AC135119.1-204ENSMUST00000228036 2663 ntBASIC5.42□□□□□ -1.54
TcraP01849 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TcraP01849 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TcraP01849 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC5.42□□□□□ -1.54
TcraP01849 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.42□□□□□ -1.54
TcraP01849 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TcraP01849 Gm7842-201ENSMUST00000217691 1379 ntBASIC5.42□□□□□ -1.54
TcraP01849 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TcraP01849 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.41□□□□□ -1.54
TcraP01849 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
TcraP01849 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TcraP01849 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC5.41□□□□□ -1.54
TcraP01849 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC5.41□□□□□ -1.54
TcraP01849 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.41□□□□□ -1.54
TcraP01849 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TcraP01849 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms