Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm12099-201ENSMUST00000118660 750 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm11796-201ENSMUST00000120208 972 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm11472-201ENSMUST00000121305 556 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm27014-201ENSMUST00000182658 937 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm28980-201ENSMUST00000187877 219 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm42437-201ENSMUST00000197263 923 ntBASIC8.06□□□□□ -1.12
NcanP55066 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.06□□□□□ -1.12
NcanP55066 Gm43762-201ENSMUST00000201521 295 ntBASIC8.06□□□□□ -1.12
NcanP55066 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.06□□□□□ -1.12
NcanP55066 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC8.06□□□□□ -1.12
NcanP55066 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NcanP55066 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
NcanP55066 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC8.06□□□□□ -1.12
NcanP55066 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC8.06□□□□□ -1.12
NcanP55066 Gm8049-201ENSMUST00000214336 1782 ntBASIC8.06□□□□□ -1.12
NcanP55066 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC8.06□□□□□ -1.12
NcanP55066 Gm38123-201ENSMUST00000194990 2779 ntBASIC8.06□□□□□ -1.12
NcanP55066 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.06□□□□□ -1.12
NcanP55066 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
NcanP55066 Gm44093-201ENSMUST00000204381 1802 ntBASIC8.06□□□□□ -1.12
NcanP55066 Gm10302-201ENSMUST00000174433 3535 ntBASIC8.06□□□□□ -1.12
NcanP55066 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.05□□□□□ -1.12
NcanP55066 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
NcanP55066 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.05□□□□□ -1.12
NcanP55066 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm7613-201ENSMUST00000139070 487 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm23007-201ENSMUST00000158951 177 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm16557-201ENSMUST00000159182 191 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm26455-201ENSMUST00000175300 92 ntBASIC8.05□□□□□ -1.12
NcanP55066 Mir3090-201ENSMUST00000175597 87 ntBASIC8.05□□□□□ -1.12
NcanP55066 Mir7033-201ENSMUST00000184259 81 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.05□□□□□ -1.12
NcanP55066 AC099934.1-201ENSMUST00000200493 79 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm18009-201ENSMUST00000203239 1016 ntBASIC8.05□□□□□ -1.12
NcanP55066 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm44538-201ENSMUST00000205615 348 ntBASIC8.05□□□□□ -1.12
NcanP55066 Gm2975-201ENSMUST00000209710 820 ntBASIC8.05□□□□□ -1.12
NcanP55066 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Gm2754-201ENSMUST00000223383 589 ntBASIC8.05□□□□□ -1.12
NcanP55066 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.05□□□□□ -1.12
NcanP55066 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NcanP55066 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC8.05□□□□□ -1.12
NcanP55066 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm10623-201ENSMUST00000209081 2639 ntBASIC8.05□□□□□ -1.12
NcanP55066 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
NcanP55066 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
NcanP55066 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
NcanP55066 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Gm43684-201ENSMUST00000199279 6573 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm44423-201ENSMUST00000203746 3158 ntBASIC8.04□□□□□ -1.12
NcanP55066 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
NcanP55066 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.04□□□□□ -1.12
NcanP55066 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Nup210l-202ENSMUST00000200410 5710 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
NcanP55066 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.04□□□□□ -1.12
NcanP55066 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
NcanP55066 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
NcanP55066 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms