Protein–RNA interactions for Protein: Q9Z321

Top3b, DNA topoisomerase 3-beta-1, mousemouse

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3bQ9Z321 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Top3bQ9Z321 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.4■□□□□ 0.7
Top3bQ9Z321 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Top3bQ9Z321 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Top3bQ9Z321 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.39■□□□□ 0.7
Top3bQ9Z321 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Top3bQ9Z321 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.39■□□□□ 0.69
Top3bQ9Z321 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Gm13534-201ENSMUST00000121169 513 ntBASIC19.39■□□□□ 0.69
Top3bQ9Z321 Gm21362-201ENSMUST00000194272 928 ntBASIC19.39■□□□□ 0.69
Top3bQ9Z321 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Top3bQ9Z321 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Top3bQ9Z321 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Top3bQ9Z321 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Top3bQ9Z321 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.37■□□□□ 0.69
Top3bQ9Z321 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Top3bQ9Z321 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.36■□□□□ 0.69
Top3bQ9Z321 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Top3bQ9Z321 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.35■□□□□ 0.69
Top3bQ9Z321 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Top3bQ9Z321 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.35■□□□□ 0.69
Top3bQ9Z321 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.35■□□□□ 0.69
Top3bQ9Z321 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Top3bQ9Z321 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.34■□□□□ 0.69
Top3bQ9Z321 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Top3bQ9Z321 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Top3bQ9Z321 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms