Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gm9847-201ENSMUST00000052528 599 ntBASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atp6v1c1Q9Z1G3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atp6v1c1Q9Z1G3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Atp6v1c1Q9Z1G3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Atp6v1c1Q9Z1G3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Atp6v1c1Q9Z1G3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Atp6v1c1Q9Z1G3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms