Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.02■□□□□ 0.32
ClcnkaQ9WUB7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClcnkaQ9WUB7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClcnkaQ9WUB7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClcnkaQ9WUB7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClcnkaQ9WUB7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ClcnkaQ9WUB7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Gm8495-201ENSMUST00000188740 694 ntBASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ClcnkaQ9WUB7 Rarb-207ENSMUST00000225921 2756 ntBASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Dapk1-207ENSMUST00000226059 5009 ntBASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ClcnkaQ9WUB7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ClcnkaQ9WUB7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ClcnkaQ9WUB7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ClcnkaQ9WUB7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 AV356131-201ENSMUST00000206201 750 ntBASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ClcnkaQ9WUB7 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms