Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
AmfrQ9R049 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
AmfrQ9R049 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.7■□□□□ 0.9
AmfrQ9R049 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AmfrQ9R049 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.69■□□□□ 0.9
AmfrQ9R049 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
AmfrQ9R049 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AmfrQ9R049 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.68■□□□□ 0.9
AmfrQ9R049 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AmfrQ9R049 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
AmfrQ9R049 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Gm13534-201ENSMUST00000121169 513 ntBASIC20.67■□□□□ 0.9
AmfrQ9R049 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.67■□□□□ 0.9
AmfrQ9R049 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.67■□□□□ 0.9
AmfrQ9R049 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
AmfrQ9R049 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.67■□□□□ 0.9
AmfrQ9R049 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AmfrQ9R049 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
AmfrQ9R049 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.66■□□□□ 0.9
AmfrQ9R049 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
AmfrQ9R049 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
AmfrQ9R049 Gm7860-201ENSMUST00000121190 879 ntBASIC20.66■□□□□ 0.9
AmfrQ9R049 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
AmfrQ9R049 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.66■□□□□ 0.9
AmfrQ9R049 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AmfrQ9R049 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AmfrQ9R049 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AmfrQ9R049 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AmfrQ9R049 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
AmfrQ9R049 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AmfrQ9R049 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AmfrQ9R049 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.65■□□□□ 0.9
AmfrQ9R049 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AmfrQ9R049 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.65■□□□□ 0.9
AmfrQ9R049 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AmfrQ9R049 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AmfrQ9R049 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
AmfrQ9R049 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
AmfrQ9R049 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
AmfrQ9R049 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
AmfrQ9R049 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
AmfrQ9R049 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
AmfrQ9R049 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AmfrQ9R049 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
AmfrQ9R049 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
AmfrQ9R049 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.63■□□□□ 0.89
AmfrQ9R049 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
AmfrQ9R049 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AmfrQ9R049 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AmfrQ9R049 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AmfrQ9R049 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AmfrQ9R049 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms