Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.01■□□□□ 0.95
Nr2e3Q9QXZ7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Gm6211-202ENSMUST00000167849 925 ntBASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21■□□□□ 0.95
Nr2e3Q9QXZ7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nr2e3Q9QXZ7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nr2e3Q9QXZ7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nr2e3Q9QXZ7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nr2e3Q9QXZ7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Nr2e3Q9QXZ7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Nr2e3Q9QXZ7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Gm10602-201ENSMUST00000098239 609 ntBASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nr2e3Q9QXZ7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Nr2e3Q9QXZ7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nr2e3Q9QXZ7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nr2e3Q9QXZ7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms