Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.64■□□□□ 0.58
Shroom3Q9QXN0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.64■□□□□ 0.58
Shroom3Q9QXN0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shroom3Q9QXN0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shroom3Q9QXN0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shroom3Q9QXN0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Gm10252-201ENSMUST00000209541 832 ntBASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.62■□□□□ 0.57
Shroom3Q9QXN0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Gm13168-201ENSMUST00000121771 632 ntBASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Shroom3Q9QXN0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Gm22240-201ENSMUST00000175225 82 ntBASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shroom3Q9QXN0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Gm20049-201ENSMUST00000219950 730 ntBASIC18.59■□□□□ 0.57
Shroom3Q9QXN0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom3Q9QXN0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom3Q9QXN0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.58■□□□□ 0.57
Shroom3Q9QXN0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.58■□□□□ 0.57
Shroom3Q9QXN0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shroom3Q9QXN0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom3Q9QXN0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom3Q9QXN0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Shroom3Q9QXN0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shroom3Q9QXN0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Shroom3Q9QXN0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms