Protein–RNA interactions for Protein: Q9D7V2

Lysmd2, LysM and putative peptidoglycan-binding domain-containing protein 2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd2Q9D7V2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lysmd2Q9D7V2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lysmd2Q9D7V2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd2Q9D7V2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd2Q9D7V2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd2Q9D7V2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lysmd2Q9D7V2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lysmd2Q9D7V2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd2Q9D7V2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd2Q9D7V2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd2Q9D7V2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Gm7417-201ENSMUST00000192950 473 ntBASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.29■□□□□ 0.04
Lysmd2Q9D7V2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms