Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Gm40881-201ENSMUST00000223397 166 ntBASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Upk3bl1Q9D701 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Gm10232-201ENSMUST00000089221 720 ntBASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Upk3bl1Q9D701 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.83■□□□□ 0.29
Upk3bl1Q9D701 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Upk3bl1Q9D701 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Upk3bl1Q9D701 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Upk3bl1Q9D701 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Gm43566-201ENSMUST00000196851 808 ntBASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Upk3bl1Q9D701 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Serp2-204ENSMUST00000228055 705 ntBASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Upk3bl1Q9D701 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bl1Q9D701 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Upk3bl1Q9D701 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Upk3bl1Q9D701 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bl1Q9D701 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Upk3bl1Q9D701 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Upk3bl1Q9D701 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms