Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retreg3Q9CQV4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Retreg3Q9CQV4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retreg3Q9CQV4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retreg3Q9CQV4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retreg3Q9CQV4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retreg3Q9CQV4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retreg3Q9CQV4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retreg3Q9CQV4 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.58■□□□□ 0.57
Retreg3Q9CQV4 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.58■□□□□ 0.57
Retreg3Q9CQV4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Retreg3Q9CQV4 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.58■□□□□ 0.57
Retreg3Q9CQV4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retreg3Q9CQV4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Retreg3Q9CQV4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Retreg3Q9CQV4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg3Q9CQV4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg3Q9CQV4 Gm6365-201ENSMUST00000054711 744 ntBASIC18.58■□□□□ 0.56
Retreg3Q9CQV4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retreg3Q9CQV4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Gm12441-201ENSMUST00000121806 588 ntBASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retreg3Q9CQV4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms