Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Gm27275-201ENSMUST00000184318 272 ntBASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Trmt13-210ENSMUST00000198454 880 ntBASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cntnap4Q99P47 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cntnap4Q99P47 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cntnap4Q99P47 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cntnap4Q99P47 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cntnap4Q99P47 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cntnap4Q99P47 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Gm12896-201ENSMUST00000118430 226 ntBASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.85■□□□□ 0.77
Cntnap4Q99P47 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cntnap4Q99P47 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cntnap4Q99P47 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cntnap4Q99P47 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms