Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk9Q99J95 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.61■□□□□ 0.57
Cdk9Q99J95 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Serp2-204ENSMUST00000228055 705 ntBASIC18.61■□□□□ 0.57
Cdk9Q99J95 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk9Q99J95 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk9Q99J95 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdk9Q99J95 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.59■□□□□ 0.57
Cdk9Q99J95 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Golgb1-201ENSMUST00000023534 498 ntBASIC18.59■□□□□ 0.57
Cdk9Q99J95 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdk9Q99J95 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.59■□□□□ 0.57
Cdk9Q99J95 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cdk9Q99J95 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Gm21956-201ENSMUST00000179946 522 ntBASIC18.58■□□□□ 0.56
Cdk9Q99J95 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk9Q99J95 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.57■□□□□ 0.56
Cdk9Q99J95 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.57■□□□□ 0.56
Cdk9Q99J95 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.57■□□□□ 0.56
Cdk9Q99J95 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk9Q99J95 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk9Q99J95 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms