Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a3Q921V7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a3Q921V7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a3Q921V7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a3Q921V7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a3Q921V7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Slc44a3Q921V7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.29■□□□□ 0.52
Slc44a3Q921V7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a3Q921V7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc44a3Q921V7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Slc44a3Q921V7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Slc44a3Q921V7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc44a3Q921V7 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.25■□□□□ 0.51
Slc44a3Q921V7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc44a3Q921V7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc44a3Q921V7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Slc44a3Q921V7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms