Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb20Q91XZ9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Rab3c-203ENSMUST00000224180 967 ntBASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb20Q91XZ9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb20Q91XZ9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Gm44136-201ENSMUST00000203819 1106 ntBASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb20Q91XZ9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb20Q91XZ9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb20Q91XZ9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb20Q91XZ9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Gm14716-201ENSMUST00000120138 718 ntBASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb20Q91XZ9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb20Q91XZ9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb20Q91XZ9 Gm6991-201ENSMUST00000218475 1178 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms