Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb4Q91XZ6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.37■□□□□ 0.53
Pcdhb4Q91XZ6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhb4Q91XZ6 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.35■□□□□ 0.53
Pcdhb4Q91XZ6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb4Q91XZ6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb4Q91XZ6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb4Q91XZ6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb4Q91XZ6 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.33■□□□□ 0.52
Pcdhb4Q91XZ6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb4Q91XZ6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb4Q91XZ6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms