Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhga6Q91XY2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhga6Q91XY2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhga6Q91XY2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.33■□□□□ 0.53
Pcdhga6Q91XY2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdhga6Q91XY2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhga6Q91XY2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.33■□□□□ 0.53
Pcdhga6Q91XY2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhga6Q91XY2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhga6Q91XY2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhga6Q91XY2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga6Q91XY2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga6Q91XY2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga6Q91XY2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms