Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb21Q91V48 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb21Q91V48 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Gm6420-201ENSMUST00000193885 723 ntBASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhb21Q91V48 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Gm7290-201ENSMUST00000104990 617 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Gm12918-201ENSMUST00000120234 636 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Gm15710-201ENSMUST00000121821 636 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Gm5075-201ENSMUST00000196916 622 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhb21Q91V48 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb21Q91V48 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb21Q91V48 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Nespas-201ENSMUST00000143738 1083 ntBASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb21Q91V48 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 156.5 ms